Software and Hardware

Software

Source code is available on request, by email to vi2108@cumc.columbia.edu

  • 2002 Human Ventricle
    • Fortran Matlab
    • This source will reproduce the figures and results from the 2002 Biophys J publication.
  • 2002 Human Ventricle revision 2
    • Fortran Matlab
    • This source code contains updates to more closely replicate human IKr and IKs densities based on response to pharmacologic challenge, and replaces the Markov model for INa and IKs (as described in the 2013 PLOS One publication)
  • 2010 Human Purkinje Cell
    • Fortran Matlab
    • This source will reproduce the figures and results from the 2010 J Physiol publication.
  • 2010 Human Purkinje Cell revision 2
    • Fortran Matlab
    • This code contains revisions to HCN Markov model and IHCN density to more accurately represent channel kinetics

Hardware

  • Multi-core CPU Workstations
  • GPU Workstation - powered by NVIDIA TESLA multicore graphics processing unit
  • Custom designed electrophysiology data acquisition hardware and software
  • Additional high performance computing resources (available at Columbia Systems Biology, C2B2)
  • 3D Electroanatomic Mapping Systems (available at Columbia University Division of Cardiology, Electrophysiology Section)